Package: JMbayes2 0.5-1
JMbayes2: Extended Joint Models for Longitudinal and Time-to-Event Data
Fit joint models for longitudinal and time-to-event data under the Bayesian approach. Multiple longitudinal outcomes of mixed type (continuous/categorical) and multiple event times (competing risks and multi-state processes) are accommodated. Rizopoulos (2012, ISBN:9781439872864).
Authors:
JMbayes2_0.5-1.tar.gz
JMbayes2_0.5-1.zip(r-4.5)JMbayes2_0.5-1.zip(r-4.4)JMbayes2_0.5-1.zip(r-4.3)
JMbayes2_0.5-1.tgz(r-4.4-x86_64)JMbayes2_0.5-1.tgz(r-4.4-arm64)JMbayes2_0.5-1.tgz(r-4.3-x86_64)JMbayes2_0.5-1.tgz(r-4.3-arm64)
JMbayes2_0.5-1.tar.gz(r-4.5-noble)JMbayes2_0.5-1.tar.gz(r-4.4-noble)
JMbayes2_0.5-1.tgz(r-4.4-emscripten)JMbayes2_0.5-1.tgz(r-4.3-emscripten)
JMbayes2.pdf |JMbayes2.html✨
JMbayes2/json (API)
NEWS
| # Install 'JMbayes2' in R: |
| install.packages('JMbayes2', repos = c('https://drizopoulos.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/drizopoulos/jmbayes2/issues
- aids - Didanosine versus Zalcitabine in HIV Patients
- aids.id - Didanosine versus Zalcitabine in HIV Patients
- pbc2 - Mayo Clinic Primary Biliary Cirrhosis Data
- pbc2.id - Mayo Clinic Primary Biliary Cirrhosis Data
- prothro - Prednisone versus Placebo in Liver Cirrhosis Patients
- prothros - Prednisone versus Placebo in Liver Cirrhosis Patients
competing-riskslongitudinal-analysismixed-modelsmulti-statepersonalized-medicineprecision-medicineprediction-modelsurvival-models
Last updated 2 months agofrom:82801a3180. Checks:OK: 7 NOTE: 1 WARNING: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 19 2024 |
| R-4.5-win-x86_64 | OK | Aug 19 2024 |
| R-4.5-linux-x86_64 | NOTE | Aug 19 2024 |
| R-4.4-win-x86_64 | OK | Aug 19 2024 |
| R-4.4-mac-x86_64 | WARNING | Aug 19 2024 |
| R-4.4-mac-aarch64 | OK | Aug 19 2024 |
| R-4.3-win-x86_64 | OK | Aug 19 2024 |
| R-4.3-mac-x86_64 | OK | Aug 19 2024 |
| R-4.3-mac-aarch64 | OK | Aug 19 2024 |
Exports:accelerationareacalibration_metricscalibration_plotcoefcoefscompare_jmcreate_foldscrisk_setupcumuplotdensplotDexpDexpitfamilyfixefgelman_diagggdensityplotggtraceplotjmmodel.framemodel.matrixpoly2poly3poly4ranefrc_setupslopetermstraceplottvtvAUCtvBriertvEPCEtvROCvabsvaluevelocityvexpvexpitvlogvlog10vlog2vsqrt
Dependencies:clicodacolorspacefansifarverggplot2GLMMadaptivegluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmatrixStatsmgcvmunsellnlmeparallellypillarpkgconfigR6RColorBrewerRcppRcppArmadillorlangscalessurvivaltibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Time-Dependent Predictive Accuracy Measures for Joint Models | calibration_metrics calibration_plot create_folds tvAUC tvAUC.jm tvAUC.tvROC tvBrier tvEPCE tvROC tvROC.jm |
| Didanosine versus Zalcitabine in HIV Patients | aids aids.id |
| Transform Competing Risks Data in Long Format | crisk_setup |
| Joint Models for Longitudinal and Time-to-Event Data | acceleration area coefs Dexp Dexpit jm poly2 poly3 poly4 slope tv vabs value velocity vexp vexpit vlog vlog10 vlog2 vsqrt |
| Various Methods for Functions from the _coda_ Package | coda_methods.jm cumuplot cumuplot.jm densplot densplot.jm gelman_diag gelman_diag.jm ggdensityplot ggdensityplot.jm ggtraceplot ggtraceplot.jm traceplot traceplot.jm |
| Various Methods for Standard Generics | coef coef.jm compare_jm family family.jm fixef fixef.jm get_links get_links.jm methods.jm model.frame model.frame.jm model.matrix model.matrix.jm ranef ranef.jm terms terms.jm |
| Extended Joint Models for Longitudinal and Time-to-Event Data | JMbayes2-package JMbayes2 |
| Mayo Clinic Primary Biliary Cirrhosis Data | pbc2 pbc2.id |
| Predictions from Joint Models | plot.predict_jm predict.jm predict.jmList |
| Prednisone versus Placebo in Liver Cirrhosis Patients | prothro prothros |
| Combine Recurring and Terminal Event Data in Long Format | rc_setup |
