{
  "_id": "6a4f560e21b18e1548500dd0",
  "Package": "GLMMadaptive",
  "Title": "Generalized Linear Mixed Models using Adaptive Gaussian\nQuadrature",
  "Version": "0.9-8",
  "Authors@R": "person(\"Dimitris\", \"Rizopoulos\", email = \"d.rizopoulos@erasmusmc.nl\",\nrole = c(\"aut\", \"cre\"), comment = c(ORCID = '0000-0001-9397-0900'))",
  "Date": "2025-03-10",
  "Maintainer": "Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>",
  "BugReports": "https://github.com/drizopoulos/GLMMadaptive/issues",
  "Description": "Fits generalized linear mixed models for a single grouping\nfactor under maximum likelihood approximating the integrals\nover the random effects with an adaptive Gaussian quadrature\nrule; Jose C. Pinheiro and Douglas M. Bates (1995)\n<doi:10.1080/10618600.1995.10474663>.",
  "Encoding": "UTF-8",
  "LazyLoad": "yes",
  "License": "GPL (>= 3)",
  "URL": "https://drizopoulos.github.io/GLMMadaptive/,\nhttps://github.com/drizopoulos/GLMMadaptive",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "6.1.1",
  "Repository": "https://drizopoulos.r-universe.dev",
  "Date/Publication": "2025-03-10 15:13:53 UTC",
  "RemoteUrl": "https://github.com/drizopoulos/glmmadaptive",
  "RemoteRef": "HEAD",
  "RemoteSha": "36b1b26d615c78159997c1fc657594acbc761e4b",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-09 07:59:25 UTC",
    "User": "root"
  },
  "Author": "Dimitris Rizopoulos [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-9397-0900>)",
  "_user": "drizopoulos",
  "_type": "src",
  "_file": "GLMMadaptive_0.9-8.tar.gz",
  "_fileid": "https://r2.ropensci.org/fba6462cbc4a370295e276c51763ed235c8e2736dd63d867e1c27b5e21b8c2c1",
  "_filesize": 307845,
  "_sha256": "fba6462cbc4a370295e276c51763ed235c8e2736dd63d867e1c27b5e21b8c2c1",
  "_expires": "2026-10-17T08:04:28.000Z",
  "_created": "2026-07-09T07:59:25.000Z",
  "_published": "2026-07-14T09:12:45.900Z",
  "_jobs": [
    {
      "job": 86068688296,
      "time": 237,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8192521949"
    },
    {
      "job": 86068688313,
      "time": 240,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8192522654"
    },
    {
      "job": 86068688312,
      "time": 158,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8192493724"
    },
    {
      "job": 86068688282,
      "time": 120,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8192480469"
    },
    {
      "job": 86067879151,
      "time": 267,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8192432902"
    },
    {
      "job": 86068688266,
      "time": 153,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8192491861"
    },
    {
      "job": 86068688293,
      "time": 148,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8192489915"
    },
    {
      "job": 86068688298,
      "time": 132,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8192483878"
    },
    {
      "job": 86068688297,
      "time": 154,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8192492298"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961",
  "_status": "success",
  "_upstream": "https://github.com/drizopoulos/glmmadaptive",
  "_commit": {
    "id": "36b1b26d615c78159997c1fc657594acbc761e4b",
    "author": "Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>",
    "committer": "Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>",
    "message": "updates\n",
    "time": 1741619633
  },
  "_maintainer": {
    "name": "Dimitris Rizopoulos",
    "email": "d.rizopoulos@erasmusmc.nl",
    "login": "drizopoulos",
    "twitter": "@drizopoulos",
    "description": "Professor of Biostatistics\nErasmus MC, Netherlands",
    "uuid": 13236687,
    "orcid": "0000-0001-9397-0900"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "nlme",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "matrixStats",
      "role": "Imports"
    },
    {
      "package": "lattice",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "pkgdown",
      "role": "Suggests"
    },
    {
      "package": "multcomp",
      "role": "Suggests"
    },
    {
      "package": "emmeans",
      "role": "Suggests"
    },
    {
      "package": "estimability",
      "role": "Suggests"
    },
    {
      "package": "effects",
      "role": "Suggests"
    },
    {
      "package": "DHARMa",
      "role": "Suggests"
    },
    {
      "package": "optimParallel",
      "role": "Suggests"
    }
  ],
  "_owner": "drizopoulos",
  "_selfowned": true,
  "_usedby": 5,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "generalized-linear-mixed-models",
    "mixed-effects-models",
    "mixed-models"
  ],
  "_stars": 64,
  "_contributors": [
    {
      "user": "drizopoulos",
      "count": 337,
      "uuid": 13236687
    },
    {
      "user": "gpapageorgiou",
      "count": 2,
      "uuid": 19683282
    }
  ],
  "_userbio": {
    "uuid": 13236687,
    "type": "user",
    "name": "Dimitris Rizopoulos",
    "followers": 240,
    "description": "Professor of Biostatistics\r\nErasmus MC, Netherlands"
  },
  "_downloads": {
    "count": 7963,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/GLMMadaptive"
  },
  "_mentions": 14,
  "_devurl": "https://github.com/drizopoulos/glmmadaptive",
  "_pkgdown": "https://drizopoulos.github.io/GLMMadaptive/",
  "_searchresults": 257,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/GLMMadaptive.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/drizopoulos/glmmadaptive",
  "_realowner": "drizopoulos",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1-3",
      "date": "2018-06-10"
    },
    {
      "version": "0.1-6",
      "date": "2018-06-12"
    },
    {
      "version": "0.2-0",
      "date": "2018-07-03"
    },
    {
      "version": "0.3-0",
      "date": "2018-09-27"
    },
    {
      "version": "0.4-0",
      "date": "2018-11-05"
    },
    {
      "version": "0.5-1",
      "date": "2019-01-29"
    },
    {
      "version": "0.6-0",
      "date": "2019-06-25"
    },
    {
      "version": "0.6-5",
      "date": "2019-09-26"
    },
    {
      "version": "0.6-8",
      "date": "2020-01-24"
    },
    {
      "version": "0.7-0",
      "date": "2020-06-25"
    },
    {
      "version": "0.7-15",
      "date": "2020-10-13"
    },
    {
      "version": "0.8-0",
      "date": "2021-01-27"
    },
    {
      "version": "0.8-2",
      "date": "2021-07-05"
    },
    {
      "version": "0.8-5",
      "date": "2022-02-07"
    },
    {
      "version": "0.8-8",
      "date": "2023-03-13"
    },
    {
      "version": "0.9-0",
      "date": "2023-06-22"
    },
    {
      "version": "0.9-1",
      "date": "2023-10-17"
    },
    {
      "version": "0.9-7",
      "date": "2025-03-04"
    }
  ],
  "_exports": [
    "anova",
    "beta.binomial",
    "beta.fam",
    "censored.normal",
    "coef",
    "confint",
    "cooks.distance",
    "cr_marg_probs",
    "cr_setup",
    "effectPlotData",
    "fitted",
    "fixef",
    "formula",
    "Gamma.fam",
    "hurdle.beta.fam",
    "hurdle.lognormal",
    "hurdle.negative.binomial",
    "hurdle.poisson",
    "marginal_coefs",
    "mixed_model",
    "model.frame",
    "model.matrix",
    "negative.binomial",
    "nobs",
    "predict",
    "ranef",
    "residuals",
    "scoring_rules",
    "simulate",
    "students.t",
    "terms",
    "unit.lindley",
    "VIF",
    "zi.binomial",
    "zi.negative.binomial",
    "zi.poisson"
  ],
  "_help": [
    {
      "page": "continuation_ratio",
      "title": "Functions to Set-Up Data for a Continuation Ratio Mixed Model",
      "topics": [
        "cr_marg_probs",
        "cr_setup"
      ]
    },
    {
      "page": "effectPlotData",
      "title": "Predicted Values for Effects Plots",
      "topics": [
        "effectPlotData",
        "effectPlotData.MixMod"
      ]
    },
    {
      "page": "extra_fams",
      "title": "Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models",
      "topics": [
        "beta.binomial",
        "beta.fam",
        "censored.normal",
        "Gamma.fam",
        "hurdle.beta.fam",
        "hurdle.lognormal",
        "hurdle.negative.binomial",
        "hurdle.poisson",
        "students.t",
        "unit.lindley",
        "zi.binomial",
        "zi.negative.binomial",
        "zi.poisson"
      ]
    },
    {
      "page": "GLMMadaptive",
      "title": "Generalized Linear Mixed Models using Adaptive Gaussian Quadrature",
      "topics": [
        "GLMMadaptive-package",
        "GLMMadaptive"
      ]
    },
    {
      "page": "marginal_coefs",
      "title": "Marginal Coefficients from Generalized Linear Mixed Models",
      "topics": [
        "marginal_coefs",
        "marginal_coefs.MixMod"
      ]
    },
    {
      "page": "mixed_model",
      "title": "Generalized Linear Mixed Effects Models",
      "topics": [
        "mixed_model"
      ]
    },
    {
      "page": "methods",
      "title": "Various Methods for Standard Generics",
      "topics": [
        "anova",
        "anova.MixMod",
        "coef",
        "coef.MixMod",
        "confint",
        "confint.MixMod",
        "cooks.distance",
        "cooks.distance.MixMod",
        "fitted",
        "fitted.MixMod",
        "fixef",
        "fixef.MixMod",
        "formula",
        "formula.MixMod",
        "methods.MixMod",
        "model.frame",
        "model.frame.MixMod",
        "model.matrix",
        "model.matrix.MixMod",
        "nobs",
        "nobs.MixMod",
        "predict",
        "predict.MixMod",
        "ranef",
        "ranef.MixMod",
        "residuals",
        "residuals.MixMod",
        "simulate",
        "simulate.MixMod",
        "terms",
        "terms.MixMod",
        "VIF",
        "VIF.MixMod"
      ]
    },
    {
      "page": "negative_binomial",
      "title": "Family function for Negative Binomial Mixed Models",
      "topics": [
        "negative.binomial"
      ]
    },
    {
      "page": "scoring_rules",
      "title": "Proper Scoring Rules for Categorical Data",
      "topics": [
        "scoring_rules"
      ]
    }
  ],
  "_pkglogo": "https://github.com/drizopoulos/glmmadaptive/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/drizopoulos/glmmadaptive/raw/HEAD/README.md",
  "_rundeps": [
    "lattice",
    "MASS",
    "matrixStats",
    "nlme"
  ],
  "_vignettes": [
    {
      "source": "GLMMadaptive.Rmd",
      "filename": "GLMMadaptive.html",
      "title": "GLMMadaptive Basics",
      "author": "Dimitris Rizopoulos",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Generalized Linear Mixed Models - Theory",
        "Model Specification",
        "Estimation",
        "Generalized Linear Mixed Models - Practice",
        "Mixed Effects Logistic Regression",
        "Penalized Mixed Effects Poisson Regression"
      ],
      "created": "2021-01-25 10:34:05",
      "modified": "2021-01-25 19:57:47",
      "commits": 2
    }
  ],
  "_score": 9.992251076433137,
  "_indexed": true,
  "_nocasepkg": "glmmadaptive",
  "_universes": [
    "drizopoulos"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.9-8",
      "date": "2026-07-09T08:03:07.000Z",
      "distro": "resolute",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/96c31197703a2f9c14c2716d9b2c31cf1dc6cd683c3707a75b608e2814a1215a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.9-8",
      "date": "2026-07-09T08:03:08.000Z",
      "distro": "resolute",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/badfb91b9020fff9f3038b0a429d525c1e66cf3071db611abad9cfddcd48c6d8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.9-8",
      "date": "2026-07-09T08:01:50.000Z",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/6a08dbb6a38bfde5288d0259a8b78a4473e81392fe2a206f6d5dbab0b4d2ee9b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.9-8",
      "date": "2026-07-09T08:01:26.000Z",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/9a7c9f1a39f01a268a64e90b567de85cfa48f95a848440ed21be9e7ad8e1b20f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.9-8",
      "date": "2026-07-09T08:02:31.000Z",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/373d76bd9f52647e9fc1435e5ac2c00fe0330d852dad50ef960780a372ab7882",
      "status": "success",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.9-8",
      "date": "2026-07-09T08:01:19.000Z",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/6baca7d483965e19149d28cbacbae7d3fb0719d60311da27e8d17350090a8ae3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.9-8",
      "date": "2026-07-09T08:01:07.000Z",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/79dc602a7b8bfdc99de9002e7164ccfa58a5ad758047b85b72108b3c41e9e60d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.9-8",
      "date": "2026-07-09T08:01:29.000Z",
      "commit": "36b1b26d615c78159997c1fc657594acbc761e4b",
      "fileid": "https://r2.ropensci.org/1a7f5eadd3b4dffa8d2b2e0e217b41c10e664ad077861e9a3336c848870c73b4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/drizopoulos/actions/runs/29003022961"
    }
  ]
}